Publications

2020

Visualizing the dynamics of exported bacterial proteins with the chemogenetic fluorescent reporter FAST., Chekli, Yankel, Peron-Cane Caroline, Dell'Arciprete Dario, Allemand Jean-François, Li Chenge, Ghigo Jean-Marc, Gautier Arnaud, Lebreton Alice, Desprat Nicolas, and Beloin Christophe , Scientific reports, Volume 10, Issue 1, p.15791, (2020)

Fluorescent secreted bacterial effectors reveal active intravacuolar proliferation of Listeria monocytogenes in epithelial cells., Peron-Cane, Caroline, Fernandez José-Carlos, Leblanc Julien, Wingertsmann Laure, Gautier Arnaud, Desprat Nicolas, and Lebreton Alice , PLoS pathogens, Volume 16, Issue 10, p.e1009001, (2020)

Stereo Darkfield Interferometry : a versatile localization method for subnanometer force spectroscopy of single molecules and 3D-tracking of single cells, Rieu, Martin, Vieille Thibault, Radou Gaël, Jeanneret Raphaël, Ruiz Nadia, Ducos Bertrand, Allemand Jean-François, and Croquette Vincent , ArXiv Preprint, (2020)

Fluorescence-free quantification of protein/nucleic-acid binding through single-molecule kinetic locking, Rieu, Martin, Valle-Orero Jessica, Ducos Bertrand, Allemand Jean-François, and Croquette Vincent , bioRxiv preprint server, (2020)

2019

Parallelized DNA tethered bead measurements to scrutinize DNA mechanical structure., Allemand, Jean-François, Tardin Catherine, and Salomé Laurence , Methods (San Diego, Calif.), (2019)

Anisotropic cellular forces support mechanical integrity of the Stratum Corneum barrier., Guo, Shuo, Domanov Yegor, Donovan Mark, Ducos Bertrand, Pomeau Yves, Gourier Christine, Perez Eric, and Luengo Gustavo S. , Journal of the mechanical behavior of biomedical materials, Volume 92, p.11-23, (2019)

PICH and TOP3A cooperate to induce positive DNA supercoiling., Bizard, Anna H., Allemand Jean-Francois, Hassenkam Tue, Paramasivam Manikandan, Sarlós Kata, Singh Manika Indrajit, and Hickson Ian D. , Nature structural & molecular biology, Volume 26, Issue 4, p.267-274, (2019)

Mechanistic characterization of the DEAD-box RNA helicase Ded1 from yeast as revealed by a novel technique using single-molecule magnetic tweezers., Raj, Saurabh, Bagchi Debjani, Orero Jessica Valle, Banroques Josette, Tanner Kyle N., and Croquette Vincent , Nucleic acids research, Volume 47, Issue 7, p.3699-3710, (2019)

Longitudinal Analyses of Blood Transcriptome During Conversion to Psychosis., Chaumette, Boris, Kebir Oussama, Pouch Juliette, Ducos Bertrand, Selimi Fekrije, Gaillard Raphael, and Krebs Marie-Odile , Schizophrenia bulletin, Volume 45, Issue 1, p.247-255, (2019)

Optical control of protein activity and gene expression by photoactivation of caged cyclofen., Hamouri, Fatima, Zhang Weiting, Aujard Isabelle, Le Saux Thomas, Ducos Bertrand, Vriz Sophie, Jullien Ludovic, and Bensimon David , Methods in enzymology, Volume 624, p.1-23, (2019)

Reduced central and peripheral inflammatory responses and increased mitochondrial activity contribute to diet-induced obesity resistance in {WSB}/{EiJ} mice, Terrien, Jérémy, Seugnet Isabelle, Seffou Bolaji, Herrero Maria J., Bowers James, Chamas Lamis, Decherf Stéphanie, Duvernois-Berthet Evelyne, Djediat Chakib, Ducos Bertrand, et al. , Scientific Reports, Volume 9, p.19696, (2019)

Simple imaging protocol for autofluorescence elimination and optical sectioning in fluorescence endomicroscopy, Zhang, Ruikang, Chouket Raja, Tebo Alison G., Plamont Marie-Aude, Kelemen Zsolt, Gissot Lionel, Faure Jean-Denis, Gautier Arnaud, Croquette Vincent, Jullien Ludovic, et al. , Optica, Volume 6, p.972–980, (2019)

Tunable and switchable soft adsorption of polymer-coated microparticles on a flat substrate, Boniello, Giuseppe, Tribet Christophe, Marie Emmanuelle, Croquette Vincent, and Zanchi Dražen , Colloids and Surfaces A: Physicochemical and Engineering Aspects, Volume 575, p.199–204, (2019)

CHAPTER 2: Super-resolution Microscopy, Yi, X., Markus T. - Z., MICHALET X., Weiss S., and Bensimon D. , Comprehensive Series in Photochemical and Photobiological Sciences, Volume 18, p.25-40, (2019)

A Model of Somitogenesis, Zhang, W., Mayr V., Ducos B., Distel M., and Bensimon D. , Journal of Statistical Physics, (2019)

2018

Connexin 43 Controls the Astrocyte Immunoregulatory Phenotype., Boulay, Anne-Cécile, Gilbert Alice, Oliveira Moreira Vanessa, Blugeon Corinne, Perrin Sandrine, Pouch Juliette, Le Crom Stéphane, Ducos Bertrand, and Cohen-Salmon Martine , Brain sciences, Volume 8, Issue 4, (2018)

Control of protein activity and gene expression by cyclofen-OH uncaging., Zhang, Weiting, Hamouri Fatima, Feng Zhiping, Aujard Isabelle, Ducos Bertrand, Ye Shixin, Weiss Shimon, Volovitch Michel, Vriz Sophie, Jullien Ludovic, et al. , Chembiochem : a European journal of chemical biology, (2018)

Rolling and aging in temperature-ramp soft adhesion., Boniello, Giuseppe, Tribet Christophe, Marie Emmanuelle, Croquette Vincent, and Zanchi Dražen , Physical review. E, Volume 97, Issue 1-1, p.012609, (2018)

DNA methylation and gene expression alterations in zebrafish early-life stages exposed to the antibacterial agent triclosan., Falisse, Elodie, Ducos Bertrand, Stockwell Peter A., Morison Ian M., Chatterjee Aniruddha, and Silvestre Frédéric , Environmental pollution (Barking, Essex : 1987), Volume 243, Issue Pt B, p.1867-1877, (2018)

Single molecule kinetics uncover roles for E. coli RecQ DNA helicase domains and interaction with SSB., Bagchi, Debjani, Manosas Maria, Zhang Weiting, Manthei Kelly A., Hodeib Samar, Ducos Bertrand, Keck James L., and Croquette Vincent , Nucleic acids research, Volume 46, Issue 16, p.8500-8515, (2018)

UPF1-like helicase grip on nucleic acids dictates processivity., Kanaan, Joanne, Raj Saurabh, Decourty Laurence, Saveanu Cosmin, Croquette Vincent, and Le Hir Hervé , Nature communications, Volume 9, Issue 1, p.3752, (2018)

HTLV-1 Tax plugs and freezes UPF1 helicase leading to nonsense-mediated mRNA decay inhibition., Fiorini, Francesca, Robin Jean-Philippe, Kanaan Joanne, Borowiak Malgorzata, Croquette Vincent, Le Hir Hervé, Jalinot Pierre, and Mocquet Vincent , Nature communications, Volume 9, Issue 1, p.431, (2018)

Macroscale fluorescence imaging against autofluorescence under ambient light., Zhang, Ruikang, Chouket Raja, Plamont Marie-Aude, Kelemen Zsolt, Espagne Agathe, Tebo Alison G., Gautier Arnaud, Gissot Lionel, Faure Jean-Denis, Jullien Ludovic, et al. , Light, science & applications, Volume 7, p.97, (2018)

Single-Molecule Studies of Nucleic Acids and Their Proteins, David, Bensimon, Vincent Croquette, Francois Allemand Jean, Xavier Michalet, and Terence Strick , Single-Molecule Studies of Nucleic Acids and Their Proteins, (2018)

Asymmetric adhesion of rod-shaped bacteria controls microcolony morphogenesis, Duvernoy, Marie-Cécilia, Mora Thierry, Ardré Maxime, Croquette Vincent, Bensimon David, Quilliet Catherine, Ghigo Jean-Marc, Balland Martial, Beloin Christophe, Lecuyer Sigoléne, et al. , Nature Communications, Volume 9, p.1120, (2018)